Tech stack
Back-end



Systems


Miscellaneous

cfDNA sWGS fragmentomics data analysis (NIPT, cancer detection, multiomics), cfDNA methylation data analysis (Nanopore & EM-seq™, NIPT, cancer detection, multiomics), cfDNA targeted cancer gene panel data analysis (SNV, Gene Fusion, UMI) [oncNGS].
scRNAseq data analysis on various projects, Multiomics single-cell data analysis: combining scRNAseq and scVDJseq, Integrating and updating single-cell analysis pipeline (Nextflow/Singularity), Training: Machine Learning, Deep Learning in Biology, Multi-omics data integration.
Microbe detection by metagenomics, identified the best matrix to achieve high sensitivity and specificity. Developed WGS based routine analysis pipeline for L. monocytogenes for Belgium national reference lab, replacing traditional approaches with broader characterization and higher efficiency.
Developed a framework to create bacterial expression compendium; Multiple bacterial compendia are created enabling studying individual species at system-level and global comparison between species.
Performed various data analysis tasks for different projects, maintained webservers and databases.
Not indicated.
PhD in bioinformatics.
Master in Artificial Intelligence (Cum laude, top 15%).
Bachelor in Control Systems (avg. 85%, top 10%).