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Qiang Fu

Post doc (Bioinformatics) @ Lab of Cytogenetics and Genome Research & ESAT
Vlaams-Brabant, België

Bioinformatician with solid experience on cfDNA fragmentomics and methylation analysis, single cell analysis, and microbial genomics, metagenomics, and transcriptomics. Proficient in Python and Bash programming, statistical analysis and visualization, database design and management, and pipeline development with Nextflow/Snakemake and Singularity. Resourceful, hardworking, goal oriented, and independent.

Tech stack

Back-end

SQL
Python
Bash

Systems

MySQL / MariaDB
PostgreSQL

Miscellaneous

Snowflake
Taal
Moedertaal Chinese
Chinese
Moedertaal
English
Vloeiend
Dutch
Gemiddeld
Werkervaring
Since 1998
Post doc (Bioinformatics) @ Lab of Cytogenetics and Genome Research & ESAT
01 May 2022 - 30 April 2025

cfDNA sWGS fragmentomics data analysis (NIPT, cancer detection, multiomics), cfDNA methylation data analysis (Nanopore & EM-seq™, NIPT, cancer detection, multiomics), cfDNA targeted cancer gene panel data analysis (SNV, Gene Fusion, UMI) [oncNGS].

Scientist (Bioinformatics) @ Janssen & VIB–TechWatch, Belgium
01 May 2020 - 30 April 2022

scRNAseq data analysis on various projects, Multiomics single-cell data analysis: combining scRNAseq and scVDJseq, Integrating and updating single-cell analysis pipeline (Nextflow/Singularity), Training: Machine Learning, Deep Learning in Biology, Multi-omics data integration.

Scientist (Bioinformatics) @ Sciensano / WIV-ISP, Belgium
01 August 2015 - 30 April 2020

Microbe detection by metagenomics, identified the best matrix to achieve high sensitivity and specificity. Developed WGS based routine analysis pipeline for L. monocytogenes for Belgium national reference lab, replacing traditional approaches with broader characterization and higher efficiency.

Software Developer @ CMPG-bioi group, KU Leuven, Belgium
01 July 2007 - 31 October 2014

Developed a framework to create bacterial expression compendium; Multiple bacterial compendia are created enabling studying individual species at system-level and global comparison between species.

Software Developer @ Computer Science Department, KU Leuven, Belgium
01 September 2003 - 30 June 2007

Performed various data analysis tasks for different projects, maintained webservers and databases.

Senior software engineer @ Neusoft Co., Ltd. Hunan, China
01 August 1998 - 31 July 2002

Not indicated.

Opleiding
Since 1994
Bioinformatics @ KU Leuven, Belgium
01 July 2009 - 01 October 2014

PhD in bioinformatics.

Artificial Intelligence @ KU Leuven, Belgium
01 September 2002 - 01 August 2003

Master in Artificial Intelligence (Cum laude, top 15%).

Control Systems @ Central South Univ., China
01 September 1994 - 01 July 1998

Bachelor in Control Systems (avg. 85%, top 10%).

Connect with Qiang Fu

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